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odepkg_testsuite_oregonator.m

%# Copyright (C) 2007-2009, Thomas Treichl <treichl@users.sourceforge.net>
%# OdePkg - A package for solving ordinary differential equations and more
%#
%# This program is free software; you can redistribute it and/or modify
%# it under the terms of the GNU General Public License as published by
%# the Free Software Foundation; either version 2 of the License, or
%# (at your option) any later version.
%#
%# This program is distributed in the hope that it will be useful,
%# but WITHOUT ANY WARRANTY; without even the implied warranty of
%# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
%# GNU General Public License for more details.
%#
%# You should have received a copy of the GNU General Public License
%# along with this program; If not, see <http://www.gnu.org/licenses/>.

%# -*- texinfo -*-
%# @deftypefn {Function File} { =} odepkg_testsuite_oregonator (@var{@@solver}, @var{reltol})
%#
%# If this function is called with two input arguments and the first input argument @var{@@solver} is a function handle describing an OdePkg solver and the second input argument @var{reltol} is a double scalar describing the relative error tolerance then return a cell array @var{solution} with performance informations about the OREGONATOR testsuite of ordinary differential equations after solving (ODE--test).
%#
%# Run examples with the command
%# @example
%# demo odepkg_testsuite_oregonator
%# @end example
%# @end deftypefn
%#
%# @seealso{odepkg}

function vret = odepkg_testsuite_oregonator (vhandle, vrtol)

  if (nargin ~= 2) %# Check number and types of all input arguments
    help  ('odepkg_testsuite_oregonator');
    error ('OdePkg:InvalidArgument', ...
      'Number of input arguments must be exactly two');
  elseif (~isa (vhandle, 'function_handle') || ~isscalar (vrtol))
    usage ('odepkg_testsuite_oregonator (@solver, reltol)');
  end

  vret{1} = vhandle; %# The name for the solver that is used
  vret{2} = vrtol;   %# The value for the realtive tolerance
  vret{3} = vret{2}; %# The value for the absolute tolerance
  vret{4} = vret{2} * 10^(-2);  %# The value for the first time step
  %# Write a debug message on the screen, because this testsuite function
  %# may be called more than once from a loop over all solvers present
  fprintf (1, ['Testsuite OREGONATOR, testing solver %7s with relative', ...
    ' tolerance %2.0e\n'], func2str (vret{1}), vrtol); fflush (1);

  %# Setting the integration algorithms option values
  vstart = 0.0;   %# The point of time when solving is started
  vstop  = 360.0; %# The point of time when solving is stoped
  vinit  = odepkg_testsuite_oregonatorinit; %# The initial values

  vopt = odeset ('Refine', 0, 'RelTol', vret{2}, 'AbsTol', vret{3}, ...
    'InitialStep', vret{4}, 'Stats', 'on', 'NormControl', 'off', ...
    'Jacobian', @odepkg_testsuite_oregonatorjac, 'MaxStep', vstop-vstart);

  %# Calculate the algorithm, start timer and do solving
  tic; vsol = feval (vhandle, @odepkg_testsuite_oregonatorfun, ...
    [vstart, vstop], vinit, vopt);
  vret{12} = toc;                        %# The value for the elapsed time
  vref = odepkg_testsuite_oregonatorref; %# Get the reference solution vector
  if (exist ('OCTAVE_VERSION') ~= 0)
    vlst = vsol.y(end,:);
  else
    vlst = vsol.y(:,end);
  end
  vret{5}  = odepkg_testsuite_calcmescd (vlst, vref, vret{3}, vret{2});
  vret{6}  = odepkg_testsuite_calcscd (vlst, vref, vret{3}, vret{2});
  vret{7}  = vsol.stats.nsteps + vsol.stats.nfailed; %# The value for all evals
  vret{8}  = vsol.stats.nsteps;   %# The value for success evals
  vret{9}  = vsol.stats.nfevals;  %# The value for fun calls
  vret{10} = vsol.stats.npds;     %# The value for partial derivations
  vret{11} = vsol.stats.ndecomps; %# The value for LU decompositions

%# Returns the results for the OREGONATOR problem
function f = odepkg_testsuite_oregonatorfun (t, y, varargin)
  f(1,1) = 77.27 * (y(2) + y(1) * (1.0 - 8.375e-6 * y(1) - y(2)));
  f(2,1) = (y(3) - (1.0 + y(1)) * y(2)) / 77.27;
  f(3,1) = 0.161 * (y(1) - y(3));

%# Returns the INITIAL values for the OREGONATOR problem
function vinit = odepkg_testsuite_oregonatorinit ()
  vinit = [1, 2, 3];

%# Returns the JACOBIAN matrix for the OREGONATOR problem
function dfdy = odepkg_testsuite_oregonatorjac (t, y, varargin)
  dfdy(1,1) =  77.27 * (1.0 - 2.0 * 8.375e-6 * y(1) - y(2));
  dfdy(1,2) =  77.27 * (1.0 - y(1));
  dfdy(1,3) =  0.0;
  dfdy(2,1) = -y(2) / 77.27;
  dfdy(2,2) = -(1.0 + y(1)) / 77.27;
  dfdy(2,3) =  1.0 / 77.27;
  dfdy(3,1) =  0.161;
  dfdy(3,2) =  0.0;
  dfdy(3,3) = -0.161;

%# Returns the REFERENCE values for the OREGONATOR problem
function y = odepkg_testsuite_oregonatorref ()
  y(1,1) = 0.10008148703185e+1;
  y(1,2) = 0.12281785215499e+4;
  y(1,3) = 0.13205549428467e+3;

%!demo
%! %% vsolver = {@ode23, @ode45, @ode54, @ode78, ...
%! %%   @odebda, @oders, @ode2r, @ode5r, @odesx};
%! vsolver = {@odebda, @oders, @ode2r, @ode5r, @odesx};
%! for vcnt=1:length (vsolver)
%!   voreg{vcnt,1} = odepkg_testsuite_oregonator (vsolver{vcnt}, 1e-7);
%! end
%! voreg

%# Local Variables: ***
%# mode: octave ***
%# End: ***

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